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  <dataset>
    <shortName>cliatgrz.dat</shortName>
    <title>Microzooplankton : Ciliate Grazing Rates</title>
    <creator>
      <individualName>
        <givenName>Johanna</givenName>
        <surName>Laybourn-Parry</surName>
      </individualName>
      <address>
        <deliveryPoint>University Road, Clifton Bristol BS8 1SS</deliveryPoint>
        <city>Bristol</city>
        <administrativeArea>- None -</administrativeArea>
        <postalCode>BS8 1S</postalCode>
        <country>GB</country>
      </address>
      <electronicMailAddress>jo.laybourn-parry@bristol.ac.uk</electronicMailAddress>
    </creator>
    <metadataProvider>
      <organizationName>McMurdo Dry Valleys LTER</organizationName>
      <onlineUrl>http://mcmlter.org/</onlineUrl>
    </metadataProvider>
    <associatedParty>
      <individualName>
        <givenName>Inigo</givenName>
        <surName>San Gil</surName>
      </individualName>
      <address>
        <deliveryPoint>Department of Biology, MSC03 2020 University of New Mexico</deliveryPoint>
        <city>Albuquerque</city>
        <administrativeArea>NM</administrativeArea>
        <postalCode>87131</postalCode>
        <country>US</country>
      </address>
      <phone phonetype="voice">(505) 277-2625</phone>
      <phone phonetype="facsimile">(505) 277-2541</phone>
      <electronicMailAddress>isangil@lternet.edu</electronicMailAddress>
      <role>data manager</role>
    </associatedParty>
    <pubDate>2014-11-10</pubDate>
    <language>English</language>
    <abstract>
      <section>
        <para>
          <literalLayout>In conjunction with the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, lakes were monitored for microzooplankton by a team based out of the University of Nottingham (led by Johanna Laybourn-Parry). This dataset shows grazing rates of ciliates feeding on cryptophytes between November 1997 and January 1998. The sample for this micro dataset was gathered at the Lake Fryxell.</literalLayout>
        </para>
      </section>
    </abstract>
    <keywordSet>
      <keyword>grazing</keyword>
      <keyword>lakes</keyword>
      <keyword>limnology</keyword>
      <keyword>zooplankton</keyword>
      <keywordThesaurus>LTER Controlled Vocabulary</keywordThesaurus>
    </keywordSet>
    <keywordSet>
      <keyword>Antarctica</keyword>
      <keyword>ciliate</keyword>
      <keyword>cryptophyte</keyword>
      <keyword>grazing</keyword>
      <keyword>ingestion</keyword>
      <keyword>lake</keyword>
      <keyword>limnology</keyword>
      <keyword>microzooplankton</keyword>
      <keywordThesaurus>Station Keywords</keywordThesaurus>
    </keywordSet>
    <keywordSet>
      <keyword>population dynamics</keyword>
      <keywordThesaurus>LTER Core Areas</keywordThesaurus>
    </keywordSet>
    <intellectualRights>
      <section>
        <title>Data Policies</title>
        <para>
          <literalLayout>This data package is released under the Creative Commons Attribution 4.0 International License (CC BY 4.0; http://creativecommons.org/licenses/by/4.0/), which allows consumers (hereinafter referred to as “Data Users”) to freely reuse, redistribute, transform, or build on this work (even commercially) so long as appropriate credit is provided. Accordingly, Data Users are required to properly cite this data package in any publications or in the metadata of any derived products that result from its use (in whole or in part). A recommended citation is provided on the summary metadata page associated with this data package in the McMurdo Dry Valleys LTER Data Catalog (https://mcmlter.org/data), and a generic citation may be found on the summary metadata page in the repository where this data package was obtained. When these data contribute significantly to the contents of a publication, Data Users must also acknowledge that data were provided by the NSF-supported McMurdo Dry Valleys Long Term Ecological Research program (OPP-2224760). This data package has been released in the spirit of open scientific collaboration. Hence, Data Users are strongly encouraged to consider consultation, collaboration, and/or co-authorship (as appropriate) with the data package creator(s). Data Users should be aware these data may be actively used by others for ongoing research; thus, coordination may be necessary to prevent duplicate publication. Data Users should also recognize that misinterpretation of data may occur if they are used outside the context of the original study. Hence, Data Users are urged to contact the data package creator(s) if they have any questions regarding methodology or results. While substantial efforts are made to ensure the accuracy of this data package (with all its components), complete accuracy cannot be guaranteed. Periodic updates to this data package may occur, and it is the responsibility of Data Users to check for new versions. This data package is made available “as is” and comes with no warranty of accuracy or fitness for use. The creator(s) of this data package and the repository where these data were obtained shall not be liable for any damages resulting from misinterpretation, use, or misuse of these data. Finally, as a professional courtesy, we kindly request Data Users notify the primary contact referenced in the metadata when these data are used in the production of any derivative work or publication. Notification should include an explanation of how the data were used, along with a digital copy of the derived product(s). Thank you.</literalLayout>
        </para>
      </section>
    </intellectualRights>
    <distribution>
      <online>
        <url function="information">https://mcm.lternet.edu/content/microzooplankton-ciliate-grazing-rates</url>
      </online>
    </distribution>
    <coverage>
      <geographicCoverage>
        <geographicDescription>The Lake Fryxell basin is formed by a moraine depression in a wider portion of the Taylor Valley. It has a number of moraine islands and shallower areas, as well as several relatively well developed deltas. The lake is fed by at least 10 meltwater streams with a total drainage catchment of 230 km2. The lake is dammed to the southwest by the Canada Glacier and is topographically closed. It is perennially ice covered; during summer months, an ice-free moat generally forms around much of the lake margin. Lake levels have risen ~2 m between 1971 and 1996. There are no surface outflows; the only known water loss is through ice ablation (evaporation, sublimation and physical scouring). Valley: Taylor Distance to Sea : 9 Maximum Length (km): 5.8 Maximum Width (km): 2.1 Maximum Depth (m): 20 Surface Area (km^2): 7.08 Ice Thickness Average Surface (m): 3.3 - 4.5 Volume (m^3 * 10^6): 25.2</geographicDescription>
        <boundingCoordinates>
          <westBoundingCoordinate>163.048782348633</westBoundingCoordinate>
          <eastBoundingCoordinate>163.259582519531</eastBoundingCoordinate>
          <northBoundingCoordinate>-77.597076416016</northBoundingCoordinate>
          <southBoundingCoordinate>-77.622711181641</southBoundingCoordinate>
          <boundingAltitudes>
            <altitudeMinimum>18</altitudeMinimum>
            <altitudeMaximum>18</altitudeMaximum>
            <altitudeUnits>meter</altitudeUnits>
          </boundingAltitudes>
        </boundingCoordinates>
      </geographicCoverage>
      <temporalCoverage>
        <rangeOfDates>
          <beginDate>
            <calendarDate>1997-11-01</calendarDate>
          </beginDate>
          <endDate>
            <calendarDate>1998-01-01</calendarDate>
          </endDate>
        </rangeOfDates>
      </temporalCoverage>
    </coverage>
    <maintenance>
      <description>
        <para>
          <literalLayout>&#160;Data for this file was submitted by Johanna Laybourn-Parry to the data manager at INSTAAR on October 21, 1998. Files were sent via e-mail as well as a hard copy. The original version of the file is stored on the Unix system in "/data1/data/lakes/plankton/laybourn-parry/DV". Upon arrival at INSTAAR, the data manager reformatted the file to present it in a relational mode. This was done using Microsoft Access. It was then exported in comma delimited ascii and MS-DOS text format to present on the web. Links to these files are provided above. &#160; On 2006, metadata was standardized to the EML format. &#160;in 2014, metadata was enhanceded with the Drupal Ecological information management system (Inigo San Gil). &#160;Completed in 2016</literalLayout>
        </para>
      </description>
    </maintenance>
    <contact>
      <organizationName>McMurdo Dry Valleys LTER</organizationName>
      <onlineUrl>http://mcmlter.org/</onlineUrl>
    </contact>
    <publisher>
      <organizationName>McMurdo Dry Valleys LTER</organizationName>
      <onlineUrl>http://mcmlter.org/</onlineUrl>
    </publisher>
    <pubPlace>McMurdo Dry Valleys LTER</pubPlace>
    <methods>
      <methodStep>
        <description>
          <section>
            <para>
              <literalLayout>Ciliate samples were collected from Lake Fryxell by drilling a hole through the thick ice cover (approximately 4m thick) above the deepest point of the lake. A 2.21 Niskin bottle was used to retrieve duplicate 500 ml water samples from a 9m depth. The water samples were fixed in Lugol's iodine and concentrated by settling, prior to counting in a Sedgewick-Rafter counting chamber under phase microscopy at x160. Cryptophyte biomass was calculated by measuring 50 cells on each preparation. Biovolume was derived by applying an ellipsoid geometric shape and converted to carbon using a conversion figure of 220fg C/microm3. Ciliate ingestion rates were determined using live cryptophytes. Ciliates were incubated in the dark at 2 degrees C until no autofluorescence from ingested cryptophytes was visible within the cells. Freshly collected cryptophytes were concentrated by gravity filtration. The ciliates were then incubated with two concentrations of cryptophytes, 8500/ml and 15000/ml. The former concentration is typical of the deep maximum of cryptophytes in Lake Fryxell, the latter is close to the highest level ever recorded in Lake Fryxell. Ingestion rates were measured at 6 intervals over an 8 hour period. Samples were fixed with ice-cold 2% glutaraldehyde (final concentration), filtered onto 10 microm polycarbonate filters and viewed under epifluorescence microscopy. Ingested cryptophytes were visible within the ciliates by their orange autofluorescence. Fifty ciliates were examined on each preparation.</literalLayout>
            </para>
          </section>
        </description>
      </methodStep>
    </methods>
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      <entityName>cliatgrz</entityName>
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        <objectName>cliatgrz.csv</objectName>
        <size>332</size>
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        <distribution>
          <online>
            <url>https://mcm.lternet.edu/sites/default/files/cliatgrz.csv</url>
          </online>
        </distribution>
      </physical>
      <attributeList>
        <attribute>
          <attributeName>LOCATION_NAME</attributeName>
          <attributeLabel>Location Name</attributeLabel>
          <attributeDefinition>Name of lake where measurement was made (lake fryxell)</attributeDefinition>
          <storageType>string</storageType>
          <measurementScale>
            <nominal>
              <nonNumericDomain>
                <textDomain>
                  <definition>Name of lake where measurement was made (lake fryxell)</definition>
                </textDomain>
              </nonNumericDomain>
            </nominal>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>BEGINNING_DATE</attributeName>
          <attributeLabel>Beginning Date</attributeLabel>
          <attributeDefinition>Earliest date on which samples were taken</attributeDefinition>
          <storageType>date</storageType>
          <measurementScale>
            <dateTime>
              <formatString>mm/dd/yyyy</formatString>
            </dateTime>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>ENDING_DATE</attributeName>
          <attributeLabel>Ending Date</attributeLabel>
          <attributeDefinition>Latest date on which samples were taken</attributeDefinition>
          <storageType>date</storageType>
          <measurementScale>
            <dateTime>
              <formatString>mm/dd/yyyy</formatString>
            </dateTime>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>Depth (m)</attributeName>
          <attributeLabel>Depth (m)</attributeLabel>
          <attributeDefinition>Depth at which sample was drawn from lake</attributeDefinition>
          <measurementScale>
            <ratio>
              <unit>
                <standardUnit>meter</standardUnit>
              </unit>
              <precision>1</precision>
              <numericDomain>
                <numberType>real</numberType>
                <bounds>
                  <minimum exclusive="false">0</minimum>
                  <maximum exclusive="false">20</maximum>
                </bounds>
              </numericDomain>
            </ratio>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>Type of Organism</attributeName>
          <attributeLabel>Type of Organism</attributeLabel>
          <attributeDefinition>Category describing species</attributeDefinition>
          <storageType>string</storageType>
          <measurementScale>
            <nominal>
              <nonNumericDomain>
                <textDomain>
                  <definition>Category describing species</definition>
                </textDomain>
              </nonNumericDomain>
            </nominal>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>Min ingest rate (cryp/cil/h)</attributeName>
          <attributeLabel>Min ingestion rate (cryptophytes/ciliate/h)</attributeLabel>
          <attributeDefinition>Lowest rate at which cryptophytes were consumed</attributeDefinition>
          <measurementScale>
            <ratio>
              <unit>
                <customUnit>#ofcryptophytes/ciliate/hour</customUnit>
              </unit>
              <precision>0.01</precision>
              <numericDomain>
                <numberType>real</numberType>
                <bounds>
                  <minimum exclusive="false">0</minimum>
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              </numericDomain>
            </ratio>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>Max ingest rate (cryp/cil/h)</attributeName>
          <attributeLabel>Max ingestion rate (cryptophytes/ciliate/h)</attributeLabel>
          <attributeDefinition>Highest rate at which cryptophytes were consumed</attributeDefinition>
          <measurementScale>
            <ratio>
              <unit>
                <customUnit>#ofcryptophytes/ciliate/hour</customUnit>
              </unit>
              <precision>0.01</precision>
              <numericDomain>
                <numberType>real</numberType>
                <bounds>
                  <minimum exclusive="false">0</minimum>
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              </numericDomain>
            </ratio>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>Min cryp mass rem/day (ug C/L)</attributeName>
          <attributeLabel>Min cryptophyte biomass removed daily (microg C / l)</attributeLabel>
          <attributeDefinition>Lowest amount of cryptophyte biomass consumed in 24 hours</attributeDefinition>
          <measurementScale>
            <ratio>
              <unit>
                <customUnit>microgofcarbon/liter</customUnit>
              </unit>
              <precision>1</precision>
              <numericDomain>
                <numberType>real</numberType>
                <bounds>
                  <minimum exclusive="false">0</minimum>
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            </ratio>
          </measurementScale>
          <missingValueCode>
            <code>Null</code>
            <codeExplanation>None given</codeExplanation>
          </missingValueCode>
        </attribute>
        <attribute>
          <attributeName>Max cryp mass rem/day (ug C/L)</attributeName>
          <attributeLabel>Max cryptophyte biomass removed daily (microg C / l)</attributeLabel>
          <attributeDefinition>Highest amount of cryptophyte biomass consumed in 24 hours</attributeDefinition>
          <measurementScale>
            <ratio>
              <unit>
                <customUnit>microgofcarbon/liter</customUnit>
              </unit>
              <precision>1</precision>
              <numericDomain>
                <numberType>real</numberType>
                <bounds>
                  <minimum exclusive="false">0</minimum>
                </bounds>
              </numericDomain>
            </ratio>
          </measurementScale>
          <missingValueCode>
            <code>Null</code>
            <codeExplanation>None given</codeExplanation>
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      </attributeList>
    </dataTable>
  </dataset>
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