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  <dataset>
    <shortName>flgltgrz</shortName>
    <title>Microzooplankton : Flagellate Grazing in Lakes Hoare and Fryxell</title>
    <creator>
      <individualName>
        <givenName>Johanna</givenName>
        <surName>Laybourn-Parry</surName>
      </individualName>
      <address>
        <deliveryPoint>University Road, Clifton Bristol BS8 1SS</deliveryPoint>
        <city>Bristol</city>
        <administrativeArea>- None -</administrativeArea>
        <postalCode>BS8 1S</postalCode>
        <country>GB</country>
      </address>
      <electronicMailAddress>jo.laybourn-parry@bristol.ac.uk</electronicMailAddress>
    </creator>
    <metadataProvider>
      <organizationName>McMurdo Dry Valleys LTER</organizationName>
      <onlineUrl>http://mcmlter.org/</onlineUrl>
    </metadataProvider>
    <associatedParty>
      <individualName>
        <givenName>Inigo</givenName>
        <surName>San Gil</surName>
      </individualName>
      <address>
        <deliveryPoint>Department of Biology, MSC03 2020 University of New Mexico</deliveryPoint>
        <city>Albuquerque</city>
        <administrativeArea>NM</administrativeArea>
        <postalCode>87131</postalCode>
        <country>US</country>
      </address>
      <phone phonetype="voice">(505) 277-2625</phone>
      <phone phonetype="facsimile">(505) 277-2541</phone>
      <electronicMailAddress>isangil@lternet.edu</electronicMailAddress>
      <role>data manager</role>
    </associatedParty>
    <pubDate>2014-11-10</pubDate>
    <language>English</language>
    <abstract>
      <section>
        <para>
          <literalLayout>In conjunction with the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, lakes were monitored for microzooplankton by a team based out of the University of Nottingham (led by Johanna Laybourn-Parry). This dataset shows grazing rates of heterotrophic and mixotrophic flagellates found in Lakes Hoare and Fryxell at various depths and dates.</literalLayout>
        </para>
      </section>
    </abstract>
    <keywordSet>
      <keyword>bacteria</keyword>
      <keyword>biomass</keyword>
      <keyword>grazing</keyword>
      <keyword>lakes</keyword>
      <keywordThesaurus>LTER Controlled Vocabulary</keywordThesaurus>
    </keywordSet>
    <keywordSet>
      <keyword>population dynamics</keyword>
      <keywordThesaurus>LTER Core Areas</keywordThesaurus>
    </keywordSet>
    <intellectualRights>
      <section>
        <title>Data Policies</title>
        <para>
          <literalLayout>This data package is released under the Creative Commons Attribution 4.0 International License (CC BY 4.0; http://creativecommons.org/licenses/by/4.0/), which allows consumers (hereinafter referred to as “Data Users”) to freely reuse, redistribute, transform, or build on this work (even commercially) so long as appropriate credit is provided. Accordingly, Data Users are required to properly cite this data package in any publications or in the metadata of any derived products that result from its use (in whole or in part). A recommended citation is provided on the summary metadata page associated with this data package in the McMurdo Dry Valleys LTER Data Catalog (https://mcmlter.org/data), and a generic citation may be found on the summary metadata page in the repository where this data package was obtained. When these data contribute significantly to the contents of a publication, Data Users must also acknowledge that data were provided by the NSF-supported McMurdo Dry Valleys Long Term Ecological Research program (OPP-2224760). This data package has been released in the spirit of open scientific collaboration. Hence, Data Users are strongly encouraged to consider consultation, collaboration, and/or co-authorship (as appropriate) with the data package creator(s). Data Users should be aware these data may be actively used by others for ongoing research; thus, coordination may be necessary to prevent duplicate publication. Data Users should also recognize that misinterpretation of data may occur if they are used outside the context of the original study. Hence, Data Users are urged to contact the data package creator(s) if they have any questions regarding methodology or results. While substantial efforts are made to ensure the accuracy of this data package (with all its components), complete accuracy cannot be guaranteed. Periodic updates to this data package may occur, and it is the responsibility of Data Users to check for new versions. This data package is made available “as is” and comes with no warranty of accuracy or fitness for use. The creator(s) of this data package and the repository where these data were obtained shall not be liable for any damages resulting from misinterpretation, use, or misuse of these data. Finally, as a professional courtesy, we kindly request Data Users notify the primary contact referenced in the metadata when these data are used in the production of any derivative work or publication. Notification should include an explanation of how the data were used, along with a digital copy of the derived product(s). Thank you.</literalLayout>
        </para>
      </section>
    </intellectualRights>
    <distribution>
      <online>
        <url function="information">https://mcm.lternet.edu/content/microzooplankton-flagellate-grazing-lakes-hoare-and-fryxell</url>
      </online>
    </distribution>
    <coverage>
      <geographicCoverage>
        <geographicDescription>The Lake Fryxell basin is formed by a moraine depression in a wider portion of the Taylor Valley. It has a number of moraine islands and shallower areas, as well as several relatively well developed deltas. The lake is fed by at least 10 meltwater streams with a total drainage catchment of 230 km2. The lake is dammed to the southwest by the Canada Glacier and is topographically closed. It is perennially ice covered; during summer months, an ice-free moat generally forms around much of the lake margin. Lake levels have risen ~2 m between 1971 and 1996. There are no surface outflows; the only known water loss is through ice ablation (evaporation, sublimation and physical scouring). Valley: Taylor Distance to Sea : 9 Maximum Length (km): 5.8 Maximum Width (km): 2.1 Maximum Depth (m): 20 Surface Area (km^2): 7.08 Ice Thickness Average Surface (m): 3.3 - 4.5 Volume (m^3 * 10^6): 25.2</geographicDescription>
        <boundingCoordinates>
          <westBoundingCoordinate>163.048782348633</westBoundingCoordinate>
          <eastBoundingCoordinate>163.259582519531</eastBoundingCoordinate>
          <northBoundingCoordinate>-77.597076416016</northBoundingCoordinate>
          <southBoundingCoordinate>-77.622711181641</southBoundingCoordinate>
          <boundingAltitudes>
            <altitudeMinimum>18</altitudeMinimum>
            <altitudeMaximum>18</altitudeMaximum>
            <altitudeUnits>meter</altitudeUnits>
          </boundingAltitudes>
        </boundingCoordinates>
      </geographicCoverage>
      <geographicCoverage>
        <geographicDescription>Lake Hoare occupies a narrower portion of the Taylor Valley, dammed by the Canada Glacier. It would drain almost completely without this dam. There are a number of islands which may be related to an old terminal of Canada Glacier. The lake is fed primarily from direct runoff from the glacier, as well as meltwater streams. (Lake level rose ~1.5 m between 1972 and 1996). There are no surface outflows; the only known water loss is through ice ablation (evaporation, sublimation and physical scouring). Valley: Taylor Distance to Sea : 15 Maximum Length (km): 4.2 Maximum Width (km): 1 Maximum Depth (m): 34 Surface Area (km^2): 1.94 Ice Thickness Average Surface (m): 3.1 - 5.5 Volume (m^3 * 10^6): 17.5</geographicDescription>
        <boundingCoordinates>
          <westBoundingCoordinate>162.784423828125</westBoundingCoordinate>
          <eastBoundingCoordinate>162.935836791992</eastBoundingCoordinate>
          <northBoundingCoordinate>-77.623085021973</northBoundingCoordinate>
          <southBoundingCoordinate>-77.639259338379</southBoundingCoordinate>
          <boundingAltitudes>
            <altitudeMinimum>73</altitudeMinimum>
            <altitudeMaximum>73</altitudeMaximum>
            <altitudeUnits>meter</altitudeUnits>
          </boundingAltitudes>
        </boundingCoordinates>
      </geographicCoverage>
      <temporalCoverage>
        <rangeOfDates>
          <beginDate>
            <calendarDate>1997-11-07</calendarDate>
          </beginDate>
          <endDate>
            <calendarDate>1998-01-26</calendarDate>
          </endDate>
        </rangeOfDates>
      </temporalCoverage>
    </coverage>
    <maintenance>
      <description>
        <para>
          <literalLayout>Data for this file was submitted by Johanna Laybourn-Parry to the data manager at INSTAAR on October 21, 1998. Files were sent via e-mail as well as a hard copy. The original version of the file is stored on the Unix system in "/data1/data/lakes/plankton/laybourn-parry/DV". Upon arrival at INSTAAR, the data manager reformatted the file using Microsoft Access to present it in a relational mode. It was then exported in comma delimited ascii and MS-DOS text format to present on the web. Links to these files are provided above.</literalLayout>
        </para>
      </description>
    </maintenance>
    <contact>
      <organizationName>McMurdo Dry Valleys LTER</organizationName>
      <onlineUrl>http://mcmlter.org/</onlineUrl>
    </contact>
    <publisher>
      <organizationName>McMurdo Dry Valleys LTER</organizationName>
      <onlineUrl>http://mcmlter.org/</onlineUrl>
    </publisher>
    <pubPlace>McMurdo Dry Valleys LTER</pubPlace>
    <methods>
      <methodStep>
        <description>
          <section>
            <para>
              <literalLayout>The water column was sampled at the deepest point in each lake with a 2.21 Niskin bottle, through a hole drilled in thick ice cover (approximately 4m thick). Duplicate 60ml samples from each depth were fixed in buffered glutaraldehyde to a final concentration of 2% and stored in the dark at 4 degrees C prior to being analyzed for bacteria. Fo bacteria counts, 1-2ml samples were stained with DAPI (4', 6-diamindino-2-phenylindole),filtered onto 0.2 microm black polycarbonate membrane filters and then viewed under UV epifluorescence microscopy. Ten Whipple grids were counted on each filter and the mean value determined. For cryptophyte counts, 30-50ml of sample was stained with DAPI, filtered onto a 2.0 microm polycarbonate membrane filter and viewed under epifluorescence. Twenty Whipple grids were counted on each filter to determine mean abundance. Biomass values for bacteria were derived by measuring 100 cells on each preparation using a Patterson graticule at a magnification of x1600. Mean cell volumes were converted to carbon values by applying a conversion factor of 220fg C/microm3. Cryptophyte biomass was calculated by measuring 50 cells on each preparation. Biovolume was derived by applying an ellipsoid geometric shape and converted to carbon using a conversion figure of 220fg C/microm3. Flagellate ingestion rates were determined using fluorescently labelled bacteria (FLB). FLBs were prepared by labelling bacteria cultured from Lake Fryxell with DTAF [5-(4,6-dichlorotriazin-2-yl) aminofluorscein]. Ingestion rates were measured in flagellates collected from 6m and 12m in Lake Hoare and 6m, 8m, and 9m in Lake Fryxell. Incubations were conducted in situ at the appropriate depths using 60ml acid rinsed Nalgene bottles. Duplicate 50ml samples were fixed with ice-cold 2% phosphate buffered glutaraldehyde (final concentration) after 30 minutes, 1 hour, 2 hours and 3.5 hours. Samples were stained with DAPI filtered onto a 5 microm polycarbonate filter and viewed under epifluorescence microscopy. Four hundred cryptophyte cells were examined on each preparation, and the number of FLB in each cell recorded. Ingestion rates were calculated using the linear portion of the uptake curves.</literalLayout>
            </para>
          </section>
        </description>
      </methodStep>
    </methods>
    <dataTable>
      <entityName>flgltgrz</entityName>
      <physical>
        <objectName>flgltgrz.csv</objectName>
        <size>1444</size>
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          <online>
            <url>https://mcm.lternet.edu/sites/default/files/flgltgrz.csv</url>
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      <attributeList>
        <attribute>
          <attributeName>Location</attributeName>
          <attributeLabel>Location</attributeLabel>
          <attributeDefinition>Name of lake where measurement was made</attributeDefinition>
          <storageType>string</storageType>
          <measurementScale>
            <nominal>
              <nonNumericDomain>
                <textDomain>
                  <definition>Name of lake where measurement was made</definition>
                </textDomain>
              </nonNumericDomain>
            </nominal>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>Date</attributeName>
          <attributeLabel>Date</attributeLabel>
          <attributeDefinition>Date on which sample was gathered</attributeDefinition>
          <storageType>date</storageType>
          <measurementScale>
            <dateTime>
              <formatString>mm/dd/yyyy</formatString>
            </dateTime>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>Depth (m)</attributeName>
          <attributeLabel>Depth (m)</attributeLabel>
          <attributeDefinition>Depth at which sample was drawn from lake</attributeDefinition>
          <measurementScale>
            <ratio>
              <unit>
                <standardUnit>meter</standardUnit>
              </unit>
              <precision>1</precision>
              <numericDomain>
                <numberType>real</numberType>
                <bounds>
                  <minimum exclusive="false">6</minimum>
                  <maximum exclusive="false">12</maximum>
                </bounds>
              </numericDomain>
            </ratio>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>Type of Organism</attributeName>
          <attributeLabel>Type of Organism</attributeLabel>
          <attributeDefinition>Category describing species</attributeDefinition>
          <storageType>string</storageType>
          <measurementScale>
            <nominal>
              <nonNumericDomain>
                <textDomain>
                  <definition>Category describing species</definition>
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          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>Bacteria grazing rate/h/indiv</attributeName>
          <attributeLabel>Bacteria grazing rate/h/indiv</attributeLabel>
          <attributeDefinition>Rate at which bacteria was consumed</attributeDefinition>
          <measurementScale>
            <ratio>
              <unit>
                <customUnit>#ofbacteria/hour/individual</customUnit>
              </unit>
              <precision>0.1</precision>
              <numericDomain>
                <numberType>real</numberType>
                <bounds>
                  <minimum exclusive="false">0</minimum>
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            </ratio>
          </measurementScale>
        </attribute>
        <attribute>
          <attributeName>%Bacterial biomass grazed daily</attributeName>
          <attributeLabel>%Bacterial biomass grazed daily</attributeLabel>
          <attributeDefinition>Proportion of bacterial biomass consumed in 24 hours</attributeDefinition>
          <measurementScale>
            <ratio>
              <unit>
                <standardUnit>dimensionless</standardUnit>
              </unit>
              <precision>0.1</precision>
              <numericDomain>
                <numberType>real</numberType>
                <bounds>
                  <minimum exclusive="false">0</minimum>
                  <maximum exclusive="false">100</maximum>
                </bounds>
              </numericDomain>
            </ratio>
          </measurementScale>
          <missingValueCode>
            <code>Null</code>
            <codeExplanation>None given</codeExplanation>
          </missingValueCode>
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